The IOCCG bibliography is updated periodically when new references are submitted by readers. Another useful ocean colour bibliography is the searchable Historic Ocean Colour Archive assembled by Marcel Wernand, with articles and books written between the 17th and early 20th century.
If you would like to submit a peer-reviewed publication to be included in the IOCCG Bibliography, please send the reference to Raisha Lovindeer using the following format: Lastname1, Initials1., Lastname2, Initials2., etc. (DATE). Full title of publication, Journal Abbreviation, Volume, Page numbers, DOI (if available). Please also check to see if the reference is not already in the database (search by first author). It is not necessary to send the PDF file as an attachment. Note that only peer-reviewed articles will be accepted.
If you would like to view recently-published papers, enter the current year in “Search by Keyword”. You can also search the database using keywords or the author’s last name. For papers dealing with Remote Sensing of Marine Litter and Debris, use the keyword “RSMLD”. You can also view the Datasets Bibliography for remote sensing and marine litter and debris.
Bibliography
Alvain, S., C. Moulin, Y. Dandonneau, and F. M. Bréon (2005). Remote sensing of phytoplankton groups in case 1 waters from global SeaWiFS imagery. Deep Sea Res. I, 52, 1989-2004.
Alvain, S., C. Moulin, Y. Dandonneau, H. Loisel, and F. M. Bréon (2006). A species-dependent bio-optical model of case I waters for global ocean color processing. Deep Sea Res. I, In press.
Alvain, S., Loisel, H. and Dessailly, D. (2012). Theoretical analysis of ocean color radiances anomalies and implications for phytoplankton groups detection in case 1 waters. Optics Express 20(2): 1070-1083 [PDF File ]
Amin, R. Zhou, J. Gilerson, A. Gross, B. Moshary, F. and Ahmed, S. (2009). Novel optical techniques for detecting and classifying toxic dinoflagellate Karenia brevis blooms using satellite imagery. Optics Express 17: 9126 – 9144.
Ammenberg, P., Flink, P., Lindell, T., Pierson, T., and Strombeck, N. (2002). Bio-optical modelling combined with remote sensing to assess water quality. Int. J. Rem. Sens., 23(8): 1621-1638.
Amos, C.L. and Topliss, B.J. (1985). Discrimination of suspended particulate matter in the Bay of Fundy using the nimbus 7 coastal zone color scanner. Can. J. Rem. Sens., 11: 85-92.
Anderson, C.A., D.A. Siegel, M.A. Brzezinski, N. Guillocheau, (2008). Controls on Temporal Patterns in Phytoplankton Community Structure in the Santa Barbara Channel, California. Journal of Geophysical Research, Oceans, 113, C04038, doi:10.1029/2007JC004321 [PDF]
Anderson, CR, Kudela, RM, Benitez-Nelson, C, Sekula-Wood, E., Burrell, CT, Chao,Y, Langlois, G, Goodman, J, and Siegel, DA (2011). Detecting toxic diatom blooms from ocean color and a regional ocean model. Geophys. Res. Lett. 38: L04603, doi:10.1029/2010GL045858, 2011
Anderson,W. Gnanadesikan, A. and Wittenberg A. (2009). Regional impacts of ocean color on tropical Pacific variability. Ocean Sci. Discuss., 6: 243-275
André, J.-M. (1992). Ocean color remote-sensing and the subsurface vertical structure of phytoplankton pigments. Deep-Sea Res. I.,39: 763-779.
André, J.-M., and Morel, A. (1989). Simulated effects of barometric pressure and ozone content upon the estimate of marine phytoplankton from space. J. Geophys. Res., 94: 1029-1037.
André, J.-M., and Morel, A. (1991). Atmospheric corrections and interpretation of marine radiances in CZCS imagery, revisited. Oceanol. Acta., 14: 3-22.
Andriolo, U., Garcia-Garin, O., Vighi, M., Borrell, A., and Gonçalves, G. (2022) . Beached and floating litter surveys by unmanned aerial vehicles: operational analogies and differences, Remote Sens. (Basel), 14, 1336(1331-1312), https://doi.org/10.3390/rs14061336.
Andriolo, U., Gonçalves, G., Bessa, F., Sobral, P. (2020). Mapping marine litter on coastal dunes with unmanned aerial systems: A showcase on the Atlantic Coast. Science of the Total Environment, 736: https://doi.org/10.1016/j.scitotenv.2020.139632
Andriolo, U., Gonçalves, G., Rangel-Buitrago, N., Paterni, M., Bessa, F., Gonçalves, L., Sobral, P., Bini, M., Duarte, D., Fontan-Bouzas, A., Gonçalves, D., Kataoka, T., Luppichini, M., Pinto, L., Topouzelis, K., V ´ elez-Mendoza, A., Merlino, S., (2021). Drones for litter mapping: An inter-operator concordance test in marking beached items on aerial images. Marine Pollution Bulletin, 169, 112542. https://doi.org/10.1016/j.marpolbul.2021.112542
Andriolo, U., Gonçalves, G., Sobral, P., and Bessa, F.(2021) Spatial and size distribution of macro-litter on coastal dunes from drone images: A case study on the Atlantic coast, Mar. Pollut. Bull., 169, 112490, https://doi.org/10.1016/j.marpolbul.2021.112490.
Andriolo, U., Gonçalves, G., Sobral, P., Fontán-Bouzas, Á., Bessa, F. (2020). Beach-dune morphodynamics and marine macro-litter abundance: An integrated approach with Unmanned Aerial System. Science of the Total Environment, 749, 141474. https://doi.org/10.1016/j.scitotenv.2020.141474
Anstee, J., Dekker, A., Byrne, G., Daniel, P., Held, A., and Miller, J. (2000). Use of hyperspectral imaging for benthic species mapping in South Australian coastal waters. 10th Australasian Remote Sensing and Photogrammetry Conference, 1051-1061.
Antoine D, D.A. Siegel, T Kostadinov, S. Maritorena, N.B. Nelson, B. Gentili, V. Vellucci and N. Guillocheau (2011), Variability in optical particle backscattering in three contrasting bio-optical oceanic regimes, Limnology and Oceanography, 56(3), 2011, 955–973.
Antoine D. and D. Nobileau (2006). Recent increase of the dust load over the Mediterranean Sea, as revealed from 6 years of ocean color satellite (SeaWiFS) observations. Journal of Geophysical Research, Atmosphere 111: D12214, doi:10.1029/2005JD006795.
Antoine D. and Morel A. (1995a). Modelling the seasonal course of the upper ocean pCO2: 1 : Development of a one-dimensional model. Tellus, 47B: 103-121.
Antoine D. and Morel A. (1995b). Modelling the seasonal course of the upper ocean pCO2: 2 : Validation of the model and sensitivity studies. Tellus, 47(B): 122-144.
Antoine D. and Morel A. (1999). A multiple scattering algorithm for atmospheric correction of remotely-sensed ocean colour (MERIS instrument): principle and implementation for atmospheres carrying various aerosols including absorbing ones. Int. J. Rem. Sens., 20(9): 1875-1916.
Antoine D., Morel, A., Gordon, H.R., Banzon, V.F. and R.H. Evans (2005). Bridging ocean color observations of the 1980’s and 2000’s in search of long-term trends. Journal of Geophysical Research, 110: C06009, doi:10.1029/2004JC002620.
Antoine, D. and Morel, A. (1996). Oceanic primary production 1. Adaptation of a spectral light-photosynthesis model in view of application to satellite chlorophyll observations. Global Biogeochem. Cycles, 10: 43-55.
Antoine, D. and Morel, A. 1998. Relative importance of multiple scattering by air molecules and aerosols in forming the atmospheric path radiance in the visible and near infrared parts of the spectrum. Appl. Optics, 37(12): 2245-2259.
Antoine, D., André, J-M. and Morel, A. (1996a). Oceanic primary production 2. Estimation at global scale from satellite (coastal zone color scanner) chlorophyll. Global Biogeochem. Cycles, 10: 57-69.
Antoine, D., Babin, M., Berthon, J-F., Bricaud, A., Gentili, B., Loisel, H., Maritorena, S. and Stramski , D. (2014). Shedding Light on the Sea: André Morel’s Legacy to Optical Oceanography. Annu. Rev. Marine. Sci. 6: 1-21. [Full article]
Antoine, D., F. d’Ortenzio, S. B. Hooker, G Bécu, B. Gentili, D. Tailliez, and A. J. Scott (2008). Assessment of uncertainty in the ocean reflectance determined by three satellite ocean color sensors (MERIS, SeaWiFS and MODIS-A) at an offshore site in the Mediterranean Sea (BOUSSOLE project), Journal of Geophysical Research, 113, C07013, doi:10.1029/2007JC004472. [PDF File]
Antoine, D., Morel, A. and André, J.-M. (1996b). Algal pigment distribution and primary production in the eastern Mediterranean as derived from coastal zone color scanner observations. J. Geophys. Res., 100: 16,193-16,209.
Antoine, D., Morel, A., Gentili, B., Gordon, H.R., and Barzon, V.F., Evans, R.H., Brown, J.W., Walsh, S., Baringer, W., and Li, A. (2003). In Search of Long-term Trends in Ocean Color. EOS, 84(32): 301,308-309. [PDF file]
Antoine, D., P. Guevel, J.-F. Desté, G. Bécu, F. Louis, A.J. Scott and P. Bardey, (2008). The «BOUSSOLE» buoy A new transparent-to-swell taut mooring dedicated to marine optics: design, tests and performance at sea, Journal of Atmospheric and Oceanic Technology, 25, 968-989.
Antoine, D.; Vellucci, V.; Banks, A.C.; Bardey, P.; Bretagnon, M.; Bruniquel, V.; Deru, A.; Hembise Fanton d’Andon, O.; Lerebourg, C.; Mangin, A.; Crozel, D.; Victori, S.; Kalampokis, A.; Karageorgis, A.P.; Petihakis, G.; Psarra, S.; Golbol, M.; Leymarie, E.; Bialek, A.; Fox, N.; Hunt, S.; Kuusk, J.; Laizans, K.; Kanakidou, M. (2020). ROSACE: A Proposed European Design for the Copernicus Ocean Colour System Vicarious Calibration Infrastructure. Remote Sens. 12, 1535. https://doi.org/10.3390/rs12101535
Aoyama, T. (2018). Extraction of marine debris in the Sea of Japan using satellite images, Proc. SPIE 9878, Remote Sensing of the Oceans and Inland Waters: Techniques, Applications, and Challenges, 987817 (7 May 2016); https://doi.org/10.1117/12.2220370
Apel, J.R. (1980). Satellite sensing of ocean surface dynamics. Ann. Rev. Earth Planet. Sci., 8: 303-342.
Aranuvachapun, S. (1983). Variation of atmospheric optical depth for remote sensing radiance calculations. Rem. Sens. Environ., 13: 131-147.
Aranuvachapun, S. and Perry, R. I. (1981). Spectral variations of coastal water irradiance as a measure of phytoplankton pigments. Int. J. Rem. Sens., 2: 299-312.
Arii, M., Koiwa, M., and Aoki, Y. (2014) Applicability of SAR to marine debris surveillance after the Great East Japan Earthquake. IEEE J. Sel. Top. Appl. Earth Obs. Remote Sens., 7(5), 1729-1744, https://doi.org/10.1109/JSTARS.2014.2308550
Arnone, R.A. Integrating satellite ocean color into navy operations. backscatter, August 1999, 8-12.
Arnone, R.A., Bidigare, R.R., Trees, C.C. and Brooks, J.M. (1986). Comparison of the attenuation of spectral irradiance and phytoplankton pigments within frontal zones. Proc. SPIE, 637: 126-130.
Arrigo, K.R. and Sullivan, C.W. (1994). A high resolution bio-optical model of microalgal growth: Tests using sea-ice algal community time-series data. Limnol. Oceanogr., 39: 609-631.
Arrigo, K.R. and van Dijken, G.L. (2004). Annual changes in sea-ice, chlorophyll a, and primary production in the Ross Sea, Antarctica. Deep Sea Research. II. Topical Studies in Oceanography.51: 117-138.
Arrigo, K.R., Robinson, D.H. and Sullivan, C.W. (1993). A high resolution study of the platelet ice ecosystem in McMurdo Sound, Antarctica: photosynthetic and bio-optical characteristics of a dense microalgal bloom. Mar. Ecol. Prog. Ser., 98: 173-185.
Arrigo, K.R., Robinson, D.H., Worthen, D.L., Schieber, B. and Lizotte, M.P. (1998). Bio-optical properties of the southwestern Ross Sea. J. Geophys. Res., 103: 21,683-21,695.
Arrigo, K.R., Worthen, D.L., Robinson, D.H. (2003). A coupled ocean-ecosystem model of the Ross Sea: 2. Iron regulation of phytoplankton taxonomic variability and primary production. J. Geophys. Res., 108(C7): 3231 10.1029/2001JC000856, 16 July 2003[HTML].
Arst, H. A. Erm, A. Herlevi, T. Kutser, M. Leppäranta, A. Reinart, J. Virta (2008). Optical properties of boreal lake waters in Finland and Estonia. Boreal Environment Research, 13: 133-158.
Arteaga, L.A., Rousseaux, C.S. (2023) Impact of Pacific Ocean heatwaves on phytoplankton community composition. Commun Biol 6, 263. https://doi.org/10.1038/s42003-023-04645-0
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Asamoah, B.O., Uurasjärvi, E., Räty, J., Koistinen, A., Roussey, M., Peiponen, K.-E. (2021). Towards the development of portable and in situ optical devices for detection of micro-and nanoplastics in water: A review on the current status. Polymers, 13, 730. https://doi.org/10.3390/polym13050730
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