The IOCCG bibliography is updated periodically when new references are submitted by readers. Another useful ocean colour bibliography is the searchable Historic Ocean Colour Archive assembled by Marcel Wernand, with articles and books written between the 17th and early 20th century.
If you would like to submit a peer-reviewed publication to be included in the IOCCG Bibliography, please send the reference to Raisha Lovindeer using the following format: Lastname1, Initials1., Lastname2, Initials2., etc. (DATE). Full title of publication, Journal Abbreviation, Volume, Page numbers, DOI (if available). Please also check to see if the reference is not already in the database (search by first author). It is not necessary to send the PDF file as an attachment. Note that only peer-reviewed articles will be accepted.
If you would like to view recently-published papers, enter the current year in “Search by Keyword”. You can also search the database using keywords or the author’s last name. For papers dealing with Remote Sensing of Marine Litter and Debris, use the keyword “RSMLD”. You can also view the Datasets Bibliography for remote sensing and marine litter and debris.
Bibliography
Henderson, E.W. and Steele, J.H. (1993). Problems in the meso-scale interpretation of satellite chlorophyll data. Contin. Shelf Res.13: 845-861.
Hendiarti, N., Siegel, H., Ohde, T. (2004). Investigation of different coastal processes in Indonesian waters using SeaWiFS data. Deep-Sea Research II, 51: 85-97
Hengstmann, E., Gräwe, D., Tamminga, M., and Fischer, E. K.(2017). Marine litter abundance and distribution on beaches on the Isle of Rügen considering the influence of exposition, morphology and recreational activities, Mar. Pollut. Bull., 115, 297-306, https://doi.org/10.1016/j.marpolbul.2016.12.026
Henson, S.A., Dunne, J.P., and Sarmiento, J.L. (2009). Decadal variability in North Atlantic phytoplankton blooms. J. Geophys. Res., 114: C04013, doi:10.1029/2008JC005139
Herman, A., and Węsławski, J. M. (2022). Typical and anomalous pathways of surface-floating material in the Northern North Atlantic and Arctic Ocean, Sci. Rep., 12, 20521, https://doi.org/10.1038/s41598-022-25008-5.
Hestir, E.L., Brando, V.E., Bresciani, M., Giardino, C., Matta, E., Villa, P., Dekker, A.G. (2015). Measuring freshwater aquatic ecosystems: The need for a hyperspectral global mapping satellite mission. Remote Sensing of Environment, http://dx.doi.org/10.1016/j.rse.2015.05.023. [Full article].
Hidaka, M., Matsuoka, D., Sugiyama, D., Murakami, K., Kako, S. (2022). Pixel-level image classification for detecting beach litter using a deep learning approach, Mar. Pollut. Bull, 175, 113371, https://doi.org/10.1016/j.
Hieronymi, M., Bi, S., Müller, D., Schütt, E. M., Behr, D., Brockmann, C., Lebreton, C., Steinmetz, F., Stelzer, K., & Vanhellemont, Q. (2023). Ocean color atmospheric correction methods in view of usability for different optical water types. Frontiers in Marine Science, 10, 1129876. https://doi.org/10.3389/fmars.2023.1129876
Hieronymi, M., Macke, A., Zielinski, O. (2012). Modeling of wave-induced irradiance variability in the upper ocean mixed layer. Ocean Science 8: 103-120, doi:10.5194/os-8-103-2012 [Full article].
Hill, V., R. C. Zimmerman, W. P. Bissett, D. D. R. Kohler, and H.M. Dierssen (2014). Evaluating light availability and seagrass biomass and productivity using hyperspectral airborne remote sensing in Saint Joseph’s Bay, Florida. Estuaries and Coasts. DOI 10.1007/s12237-013-9764-3
Hirata T, Aiken J, Hardman-Mountford N, Smyth TJ, Barlow RG (2008). An absorption model to determine phytoplankton size classes from satellite ocean colour. Remote Sensing of Environment 112: 3153-3159.
Hirata, T. (2008). Estimation of the in situ Ultraviolet-A absorption of Seawater by a simple irradiance inversion model, Journal of Oceanography, 64(4): 561-566
Hirata, T. and Højerslev, N.K. (2008). Relationship between the irradiance reflectance and inherent optical properties of seawater. Journal of Geophysical Research, 113: (C03030) C03030:1-10
Hirata, T., Hardman-Mountford, N-J., Barlow, R., Lamont, T., Brewin, R., Smyth, T-J., Aiken, J. (2009). An inherent optical property approach to the estimation of size-specific photosynthetic rates in eastern boundary upwelling zones from satellite ocean colour: An initial assessment, Progress in Oceanography, 83: 393-397.
Hirata, T., Hardman-Mountford, N-J., Brewin, R-J-W., Aiken, J., Barlow, R., Suzuki, K., Isada, T., Howell, E., Hashioka, T., Noguchi-Aita, M. and Yamanaka, Y. (2011). Synoptic relationships between surface Chlorophyll-a and diagnostic pigments specific to phytoplankton functional types. Biogeosciences, 8: 311–327. [PDF File]
Hirata, T., N. Hardman-Mountford, J. Aiken, J. Fishwick (2009). Relationship between the distribution function of ocean nadir radiance and inherent optical properties for oceanic waters. Applied Optics, 48(17): 3130-3139
Hirawake, T., Satoh, H., Ishimaru, T., Yamaguchi, Y., and Kishino, M. (2000). Bio-optical relationship of case I waters: The difference between the low- and mid-latitude waters and the Southern Ocean. J. Oceanogr., 56: 245-260.
Hirawake, T., Takao, S., Horimoto, N., Ishimaru, T., Yamaguchi, Y., Fukuchi, M. (2011). A phytoplankton absorption-based primary productivity model for remote sensing in the Southern Ocean. Polar Biol 34:291–302 DOI 10.1007/s00300-010-0949-y [Download PDF]
Hlaing, S., A. Gilerson, R. Foster, M. Wang, R. Arnone, and S. Ahmed (2014). Radiometric calibration of ocean color satellite sensors using AERONET-OC data. Opt. Express, 22, 23385-23401. doi:10.1364/OE.22.023385
Ho, C-R., Zheng, Q. and Kuo, N-J. (2004). SeaWiFs observations of upwelling south of Madagascar: long-term variability and interaction with East Madagascar Current. Deep Sea Research. II. Topical Studies in Oceanography, 51: 59-67
Hochman, H.T., Müller-Karger, F.E. and Walsh, J.J. (1994). Interpretation of the coastal zone color scanner signature of the Orinoco River Plume. J. Geophys. Res., 99: 7443-7455.
Hoepffner, N. and Sathyendranath, S. (1992). Bio-optical characteristics of coastal waters: Absorption spectra of phytoplankton and pigment distribution in the western North Atlantic. Limnol. Oceanogr., 37: 1660-1679.
Hoepffner, N., Barker, T., Nykjaer, L., Estrada, M. and Schlittenhardt, P. (1994). Use of an analytical model to determine the primary production from satellite data in a coastal upwelling environment. Oceanol. Acta., 17: 431-442.
Hoepffner, N., Sturm, B., Finenko, Z. and Larkin, D. (1999). Depth-integrated primary production in the eastern tropical and subtropical North Atlantic basin from ocean colour imagery. Intl. J. Rem. Sens., 20: 1435-1456.
Hoge, F. E. and Lyon, P. E. (2005). New tools for the study of oceanic eddies: Satellite derived inherent optical properties. Remote Sensing of Environment 95, 444-452.
Hoge, F. E., Wright, C. W., Lyon, P. E., Swift, R. N. and Yungel, J. K. (1999b). Satellite retrieval of the absorption coefficient of phytoplankton phycoerythrin pigment: Theory and feasibility status. Applied Optics, 38(36): 7431-7441.
Hoge, F. E.; Lyon, P. E.; Mobley, C. D.; Sundman, L. K. (2003) Radiative transfer equation inversion: Theory and shape factor models for retrieval of oceanic inherent optical properties. J. Geophys. Res., 108, No. C12, 3386 10.1029/2000JC000447.
Hoge, F.E. (1994). Asymmetrical spectral curvature algorithms: oceanic-constituents sensitivities. Appl. Optics, 33: 7764-7769.
Hoge, F.E. and Lyon, P.E. (1996). Satellite retrieval of inherent optical properties by linear matrix inversion of oceanic radiance models: an analysis of model and radiance measurement errors. J. Geophys. Res., 101: 16,631-16,648.
Hoge, F.E. and Lyon, P.E. (1999). Spectral parameters of inherent optical property models: method for satellite retrieval by matrix inversion of an oceanic radiance model. Appl. Optics, 38: 1657-1662.
Hoge, F.E. and Swift, R.N. (1986a). Active-passive correlation spectroscopy: a new technique for identifying ocean color algorithm spectral regions. Appl. Optics, 25: 2571-2583.
Hoge, F.E. and Swift, R.N. (1986b). Chlorophyll pigment concentration using spectral curvature algorithms: an evaluation of present and proposed satellite ocean color sensor bands. Appl. Optics, 25: 3677-3682.
Hoge, F.E. and Swift, R.N. (1987). Ocean color spectral variability studies using solar-induced chlorophyll fluorescence. Appl. Optics, 26: 18-21.
Hoge, F.E., Berry, R.E. and Swift, R.N. (1986). Active-passive airborne ocean color measurement. 1: Instrumentation. Appl. Optics,25: 39-47.
Hoge, F.E., Swift, R.N. and Yungel, J.K. (1986). Active-passive airborne ocean color measurement. 2: Applications. Appl. Optics,25: 48-57.
Hoge, F.E., Wright, C.W. and Swift, R. N. (1987). Radiance-ratio algorithm wavelengths for remote oceanic chlorophyll determination. Appl. Optics, 26: 2082-2094. Höjerslev, N.K. (1985). Bio-optical measurements in the Southwest Florida Shelf ecosystem. J. Cons. Intl. Explor. Mer., 42: 65-82.
Hoge, F.E., Wright, C.W., Lyon, P.E., Swift, R. N. and Yungel, J. K. (1999a). Satellite retrieval of inherent optical properties by inversion of an oceanic radiance model: a preliminary algorithm. Appl. Optics, 38: 495-504.
Hoge, F.E., Wright, C.W., Lyon, P.E., Swift, R.N., Yungel, J.K.(2001). Inherent optical properties imagery of the western North Atlantic Ocean: Horizontal Spatial Variability of the Upper Mixed Layer. J. Geophys. Res., 106(C12), p. 31,129.
Höjerslev N.K., and Aas, E. (2001), Spectral light absorption by yellow substance in the Kattegat-Skagerrak area. Oceanologia,43(1): 39-60
Höjerslev, N.K. and Aarup, T. (2002). Bio-optical measurements on the Louisiana Shelf off the Missippi Delta. Est. Coast. Shelf Sci., 55: 599-611.
Höjerslev, N.K., Holt, N. and Aarup, T. (1996). Optical measurements in the North Sea – Baltic Sea transition zone. I. On the origin of the deep water in the Kattegat. Cont. Shelf. Res., 16: 1329-1342.
Holden, H., and LeDrew, E. (1999). Hyperspectral identification of coral reef features. Intl. J. Rem. Sens., 20: 2545-2563.
Holinde, L., Zielinski, O. (2016). Bio-optical characterization and light availability parameterization in Uummannaq Fjord and Vaigat–Disko Bay (West Greenland), Ocean Sci., 12: 117-128, doi:10.5194/os-12-117-2016. [ Full text]
Holligan, P.M., Viollier, M., Dupouy, C. and Aiken, J. (1983). Satellite studies on the distributions of chlorophyll and dinoflagellate blooms in the western English Channel. Contin. Shelf Res., 2: 81-96.
Holligan, P.M., Viollier, M., Dupouy, C., Aiken, J. (1983). Satellite studies on the distribution of chlorophyll and dinoflagellate blooms in the Western English Channel. Cont. Shelf Res., 2: 81-96.
Holtrop, T., and Van Der Woerd, H. J. (2021). HYDROPT: An Open-Source Framework for Fast Inverse Modelling of Multi- and Hyperspectral Observations from Oceans, Coastal and Inland Waters. Remote Sensing, 13(15), 3006. doi:10.3390/rs13153006
Holtrop, T., Huisman, J., Stomp, M., Biersteker, L., Aerts, J., Grébert, T., Partensky, F., Garczarek, L. and van der Woerd, H. J. (2020). Vibrational modes of water predict spectral niches for photosynthesis in lakes and oceans. Nat. Ecol. Evol. https://doi.org/10.1038/s41559-020-01330-x
Hooker, Stanford B., Randall N. Lind, John H. Morrow, James W. Brown, Koji Suzuki, Henry F. Houskeeper, Toru Hirawake, and Elígio de Ráus Maúre (2018). Advances in above-and in-water radiometry, volume 1: enhanced legacy and state-of-the-art instrument suites. No. NASA/TP–2018-219033/VOL. 1.
Hooker, Stanford B., Randall N. Lind, John H. Morrow, James W. Brown, Raphael M. Kudela, Henry F. Houskeeper, and Koji Suzuki. (2018) Advances in above-and in-water radiometry, volume 3: hybridspectral next-generation optical instruments. No. NASA/TP–2018-219033/VOL. 3.